YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YLR456W
Protein type:	Transmembrane
Type Confidence:	0.59
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLNEQIPKD LLRLIKSSKY VHVATCSSNC IPSVSLMHYI FVSSAETFHK HEYSIEIDCN  60
   61 DYIIFTVFEK SVTFRNVMSN PNVALLFHDW ITAKNLTLRK KSVHSKDDFS FVESESTKFN 120
  121 NFLRDLNQSE LNQVSATING IADIVNPNSE ESTYYRRLLL TVNPDADIFI LGEDTAIIKV 180
  181 NIQKIKVSDM ENNTSTYGQT VQPV

Type	Start	End	Confidence
Cytoplasmic	1	19	0.58
Transmembrane Helix	20	41	0.57
Non-Cytoplasmic	42	204	0.97