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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FMP27
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMFPINVLLY KWLIFAVTFL WSCKILLRKL LGINITWINL FKLEICGLSL EDGTVRLKSV  60
   61 RFAVFERKLF IKGLRIDSKK SSTNDLHKEL PREEERTFIE TPEDNGGGFI SKILSLSQYW 120
  121 LNGVTIILED TQLVNNDITI EKFGFFLSID NSKHIKSLRF DSFLRKLLWN GQTIIADAIF 180
  181 IVNTNLLIGE IMNPLKDGLQ VGLDLKLGDL NIPMNLLNLF INKENVDLMS NEKLLQRLAD 240
  241 TTKANEELKD EDIAKMKDDL VYAMEKFVDR IKPLKEMNVT VDKLQIKDFP LTNHPELLGM 300
  301 NKYISYNVLV SNINFNTNRF RNEMPGYTLI FEERDSPFKF SIIMARFNIY LNLNRKHQSH 360
  361 AKQLKIIEIP NVSIFGETNL FSQKFRLSNN LHAKELENAI FNIKGNISSL TIDMDPVNIS 420
  421 FIKCFLSNIK VFTSSCPKNK ILKENSHVKF LTRRRVLFDY FKCFLPLINM KFTLDDPKFV 480
  481 INDKDDLIIG KFSVFMISHH SKRYTLGNNL MEEKEETQHI FYESHWNVEL LDMKLQHIIK 540
  541 HQKYEHTILR VDSIAIEEKV QLLPDILCSA NADIDTLMLD LSELPTMVML SELVHNLDSQ 600
  601 LANVEENYFK EFYEKFASNL QNMKAECSNM AKCLRQKEIL PSDFMFQQLP DFFDYIKINI 660
  661 RDISSTLGAR SVFMPRDVFS SVDSQSSKDL IDGKLRKYCN TVEKLQIALF GDKTQWHNKI 720
  721 GSNHATMVRS GQLTNFSKDN KQNPNHKSSI ADLDDISTSD ATEVNHLWNI NLLVNDITTS 780
  781 IIGETPEVSE ELSTKTVSKV SNLSIKLFPD TESFSSNESD SKIILQINHS RGTSVVSLMS 840
  841 IFLAVSGIHT LNQIFGHCIH QKMRQSKTKQ YFLALSESKK KSCIKSIKWG QLKELLEINF 900
  901 SSEYISQIIA LPNGLRTKFE PTSTFITVKN CNTISVSGQY FRMMVESPTQ PNFWERMICI 960
  961 NGFKVMIHID LLKQQMKKLN SLQNWEKLPS AITLENDSWH FSIPHHFEMF KIIDSIPTIF1020
 1021 KSIKQMLYSL KTSKDDLIIF PHKIETPLSL PKIKLKSKRW LFSISDDPLE AELNTIFQIG1080
 1081 LQEQRERLAK LQEFNKRISE DLIKSQKNAK EMKDDFEAID NAILKHRTGL WAKDGKKRLR1140
 1141 KSATDSEIPL TPAALNINGK RDDRPDRTQF ISPEIENAYN TLLANFSDSW IKRVKEYKVK1200
 1201 ERREFDKNFS FLWGFIDYTK LPKDINKKVL PFSTNPFLMN LIIENIDIDI IRPSCGIENI1260
 1261 PNFIHDVGKG VPKNTEYSIM IPMHLDAKFS EVRWHLRDYP LPFVSIPPLS STQSKETIPM1320
 1321 RIYGDFMITE DMLQSDRELR TLFVPLIPSV TVENTDRYYS LFVPRTMTSA KIFTDLNFEI1380
 1381 NSNHTTRVTW GGSYQPAIQQ TMQCLDNFSK PPLDPSVKLG FWDKTRYLFH GKINIVWKKR1440
 1441 GKFEISLKGA KSPYMLGGES AGFIVGFDGN VNLKCNEDND PKKFLSCSAD KVHFSIPNYF1500
 1501 AKPLLVWSRP STNTMFIPNQ DDTNMQRYAS FYYLLNTTSS KNEKADKEIM GKSFIEKTGI1560
 1561 KLSGGMTLDM GILFERLGPS LNERTFESKK HYLTRLCNPI YVQDLSKHDS YAGFRSDFIH1620
 1621 MSFGLSSNSN SAYNAMQLSP NGFKAFFVWW KSFSGNFPVR RGPLFGLQSI SPKFGEHLYT1680
 1681 ISYHADVSPL FINYMYHNAD ADQILRKNYL EVAEFAGLKA KSSHFIMDLH QRKEVLTEYQ1740
 1741 AGLNVRRRVM KLKFLAGDVV CQDVDIRTVS GEFSKLNYIE EKEDAEYDIF DNDMSWLDIT1800
 1801 DFQDAFFINP DNYLPKIKIM PFAFSPQFAY QKRASYGDKY QVDPKTCKPI TPFDNRVSHG1860
 1861 CTLGHNVSLR TDLVEKRVTV LKKFREKLQE GIRKNKSAGV SEENLNDLLS KANSSVENAE1920
 1921 LLLKDFQKIF KQHEAGQTEQ PFHFDSLNLL KNTKKTLKQF EHRFFIFNVL LKWNEDARSA1980
 1981 IFKFFYYANL SNEFASLASG KGLREFEDVI KQREMTDDTT SMEAIPEGTD KANTTKQCHS2040
 2041 CDDTEFTTEN LLNIFEKNIT QLSCDIKNKI HHKFFVQFIT PQIQLTSLEN PEACVLVSSP2100
 2101 FFMLKTLEFD ANTTSNTYMQ DIFLKRHGIL FGNANAFLFN KKDYQEFFEL YFGSSSYGQD2160
 2161 KKEQWPPWLG LELGFEPSAL KKKAVVRNIS ALLHHQKLAP FSAKYDSLKD KIEDNICGYV2220
 2221 PQVNVQVNSD EYLMLTKMAL KLFLYVEPED EELKKYIEKL IIGYDIYDTA QTRKFVNDLH2280
 2281 DSEQILAVVE KELLFKRSLL DDIGKLDLSN IHNERMHQLL RLYILRKVFT SNGNNYINRT2340
 2341 LVWNIKVNET ILHLLDKIDK PFLDIAVAKL NFQRIQHTMG LRKNTVTVKM MQIFDLGENV2400
 2401 NYHCILGPLI TSSGNDTVGL ASDVPLVQIT WDVDKPVGGI KVVKNVETTL SSLTIKLEED2460
 2461 RLNKLFEWLS LKELIYDGNG DDDDGASSIF DMVSSESEEG KIEFSEDISS DFNEMLKRSS2520
 2521 DYMIVEDLKL NSFKLCISYK GKGKMRLANV TNFVFNFPTL RLSNQTLRVT DLLLALKKVL2580
 2581 IKVLIKHTGR FIGNKLKRNS KENKIADDTS PLKQLTTYNS YTEPEELR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle