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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SEC39
Protein type: Globular with Signal Peptide
Type Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEEQLYLLA CIFASRADTR NIKKLSTRLG SQSKYLEILC VLWPELDDPK NLLFLRELEE  60
   61 EVQSPEGEET TDEDVIVELL ESDSSLIPLI ESDTTTRSNR YHELQEFISK KLNNKTLENF 120
  121 EEWLRERILI CNEMIPETPL LYSVLWETAK SKVLSTKFIG WVEGVLKPLD HLNKRLHLIF 180
  181 KINEWEKMPD SELFKIIFDG VEDMQGYIGI ADVIEDELAP TLSYGKKWET FITEFFNKQQ 240
  241 FSLKSDTNYQ LFIKLYYSLE KGVKDNSEAS RKLQSNVVDI LFHNSENLFN LSSLTHKLDE 300
  301 LWSILSGFPD EITIEEQKTI TALEMKQFME FFIKCSTKFS FKEIFAITQE EESAQLAHFS 360
  361 SLCHEEFNKA NEISSFLQAM YETVLDISKD DKIFTRISMD EKLYSILEIL LQMNEFAYIE 420
  421 AIIERFDYSN NTQIYELLVK FFWHFFNNAS NGLRKEPEMK KASQTLQIIQ KHMSQRAGTN 480
  481 LTKLEVLLEI SDKLSHYSIN LNKSHNGARD TAFKPSNILE YRDCPLDIIS NLLELNPRLY 540
  541 KDLPTTKSLL FGIYDSLSIN REGQTGKVEV DLMVLHIDYA LVNLDFGTAY ELGKQVFEIC 600
  601 QEAGQHMMKA LGDEHWLTFY QMGKFVDPNW VDNEIPTEII VLQMSILGRL LEVCPLEEVE 660
  661 IVTSQWSTLE LELSARDLVK DKYALDGQND NKSKVGGIAR EIFHNVTNF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle