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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YLR413W
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFKILLPIC ALLTLTTFLL TIIATAGSTS NYKPITNIYI GDADISKINV TKVMPQVGPI  60
   61 LTVLGSALTA PNTTVDTIFG ALKAIASTEA LSPLLHLLSN AANTSATLSS LTQLAPMALL 120
  121 GTNTATTTTF SALDELLTTS KNTTELLDGF STLMSSMSTN TSSTSASLEN TVLTLLVDST 180
  181 NPIGTTESLI TLNNMTTEEK TKLSPVFELF ASSKNITATC DALETIMNST IPTSTVSSLF 240
  241 SSLKTSLAEG GNATETIMQL GSLVPSSLKP AVQAVVTLFD ETTSQNVTLS VLSTMIAENI 300
  301 TQSSSAKAAM GALTDLLNYT TNQTELLTSV ESLALSKEAA SSTNQLVALD EILSASANAS 360
  361 TVVSIIPTLE SQLANNTVLL KYVPYLFSLL AASSDPVSSF SSLVNITKWA ETNAATFMPM 420
  421 LKILNSAVNM TTITPEQLKE MTPSILEYLH IPVIYRLSIF TMCRAHLNRT MYSCSKSHAV 480
  481 QNMDFRSIVY NNIEGSDFKP YMDALNIGKD DLHLDGELQD RQHMYVPAVK AALAMNLMCI 540
  541 ITSFFLMVFL LLLSRRSVVS QKLWLALGFI SCWICIFSGL GSTIFSVILN MMKSGSKKDN 600
  601 YDVIISGSSP FYGLMWSGFV FAVLVFLCIA YCWWSSRKGA AIVEAEKAVQ ESDSTTSRII 660
  661 EEHESPIDAE KNFAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle