YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CTR3
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMGGSSSTA AKKATCKISM LWNWYTIDTC FIARSWRNDT KGKFAGSCIG CFALVVVAQW  60
   61 LTRFSRQFDV ELLKRQKIKH LASYSPEEYV VKCGEEDAKS DIEELQGFYN EPSWKTTLIS 120
  121 LQKSFIYSFY VWGPRRLNEP EDDLLKKVLS CCTLITPVDL YPTFLDHMIR VTIFVLQWGL 180
  181 SYIIMLLFMY YNGYIIISCL IGAIVGRFIF CYEPLGSLGA NGSAQGTVSY DKESDDRKCC 240
  241 L

Type	Start	End	Confidence
Cytoplasmic	1	41	0.73
Transmembrane Helix	42	62	0.80
Non-Cytoplasmic	63	177	0.49
Transmembrane Helix	178	211	0.73
Cytoplasmic	212	241	0.62