YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FLD1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKINVSRPLQ FLQWSSYIVV AFLIQLLIIL PLSILIYHDF YLRLLPADSS NVVPLNTFNI  60
   61 LNGVQFGTKF FQSIKSIPVG TDLPQTIDNG LSQLIPMRDN MEYKLDLNLQ LYCQSKTDHL 120
  121 NLDNLLIDVY RGPGPLLGAP GGSNSKDEKI FHTSRPIVCL ALTDSMSPQE IEQLGPSRLD 180
  181 VYDEEWLNTI RIEDKISLES SYETISVFLK TEIAQRNLII HPESGIKFRM NFEQGLRNLM 240
  241 LRKRFLSYII GISIFHCIIC VLFFITGCTA FIFVRKGQEK SKKHS

Type	Start	End	Confidence
Cytoplasmic	1	13	0.71
Transmembrane Helix	14	37	0.87
Non-Cytoplasmic	38	247	0.66
Transmembrane Helix	248	274	0.86
Cytoplasmic	275	285	0.65