YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YLR402W
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLFKNGARA FCILNFPSLF GATIPLPGLS ALSLFIPCTI TRQFLRHVLW NDGTGGDWVP  60
   61 NSAAFPCARW SAVGKRNKTR LRRARGQDFV SYIIRSNFES IEIWNKWAMH SLKGDFVSNN 120
  121 VTISHCHLPL SPATAIAIII CFRIVTDLKL SRLTYAFYLP GPISFLPVIP I

Type	Start	End	Confidence
Cytoplasmic	1	11	0.70
Transmembrane Helix	12	36	0.67
Non-Cytoplasmic	37	125	0.76
Transmembrane Helix	126	145	0.45
Cytoplasmic	146	171	0.44