YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113422964
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPWRHTRYL RVRPPEQLHT LRPRGILRPR APLGAGGPWE LRPGRAANGP REACFAPSDA  60
   61 TEVAASPLRR RGGCWEGRRD GGGGTGSRVR VRVKREAARV GAGPEHQAQA RRPPARTLVL 120
  121 TDATAMAMMV FPREEKLSQD EIVLGTKAVI QGLETLRGEH RALLAPLVAP EAGEAEPGSQ 180
  181 ERCILLRRSL EAIELGLGEA QIIAFDELRT DFKNPIDQGN PARARERLKN IERICCLLRK 240
  241 LVVPEYSIHG LFCLMFLCAA EWVTLGLNIP LLFYHLWRYF HRPADGSEVM YDAVSIMNAD 300
  301 ILNYCQKESW CKLAFYLLSF FYYLYSMVYT LVSF

Type	Start	End	Confidence
Non-Cytoplasmic	1	247	0.53
Transmembrane Helix	248	272	0.81
Cytoplasmic	273	312	0.50
Transmembrane Helix	313	332	0.78
Non-Cytoplasmic	333	334	0.53