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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113422699
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVGRRKLAL LWALALALAC TRHTGHAQDG SSESSYKHHP ALSPIARGPS GVPLRGATVF  60
   61 PSLRTIPVVR ASNPAHNGRV CSTWGSFHYK TFDGDVFRFP GLCNYVFSEH CGAAYEDFNI 120
  121 QLRRSQESAA PTLSRVLMKV DGVVIQLTKG SVLVNGHPVL LPFSQSGVLI QQSSSYTKVE 180
  181 ARLGLVLMWN HDDSLLLELD TKYANKTCGL CGDFNGMPVV SELLSHNTKL TPMEFGNLQK 240
  241 MDDPTEQCQD PVPEPPRNCS TGFGICEELL HGQLFSGCVA LVDVGSYLEA CRQDLCFCED 300
  301 TDLLSCVCHT LAEYSRQCTH AGGLPQDWRG PDFCPQKCPN NMQYHECRSP CADTCSNQEH 360
  361 SRACEDHCVA GCFCPEGTVL DDIGQTGCVP VSKCACVYNG AAYAPGATYS TDCTNCTCSG 420
  421 GRWSCQEVPC PGTCSVLGGA HFSTFDGKQY TVHGDCSYVL TKPCDSSAFT VLAELRRCGL 480
  481 TDSETCLKSV TLSLDGVQTV VVIKASGEVF LNQIYTQLPI SAANVTIFRP STFFIIAQTS 540
  541 LGLQLNLQLV PTMQLFMQLA PKLRGQTCGL CGNFNSIQAD DFRTLSGVVE ATAAAFFNTF 600
  601 KTQAACPNIR NSFEDPCSLS VENEKYAQHW CSQLTDADGP FGRCHAAVKP GTYYSNCMFD 660
  661 TCNCERSEDC LCAALSSYVH ACAAKGVQLG GWRDGVCTKP MTTCPKSMTY HYHVSTCQPT 720
  721 CRSLSEGDIT CSVGFIPVDG CICPKGTFLD DTGKCVQASN CPCYHRGSMI PNGESVHDSG 780
  781 AICTCTHGKL SCIGGQAPAP VCAAPMVFFD CRNATPGDTG AGCQKSCHTL DMTCYSPQCV 840
  841 PGCVCPDGLV ADGEGGCITA EDCPCVHNEA SYRAGQTIRV GCNTCTCDSR MWRCTDDPCL 900
  901 ATCAVYGDGH YLTFDGQSYS FNGDCEYTLV QNHCGGKDST QDSFRVVTEN VPCGTTGTTC 960
  961 SKAIKIFLGG FELKLSHGKV EVIGTDESQE VPYTIRQMGI YLVVDTDIGL VLLWDKKTSI1020
 1021 FINLSPEFKG RVCGLCGNFD DIAVNDFATR SRSVVGDVLE FGNSWKLSPS CPDALAPKDP1080
 1081 CTANPFRKSW AQKQCSILHG PTFAACHAHV EPARYYEACV NDACACDSGG DCECFCTAVA1140
 1141 AYAQACHEVG LCVSWRTPSI CPLFCDYYNP EGQCEWHYQP CGVPCLRTCR NPRGDCLRDV1200
 1201 RGLEGCYPKC PPEAPIFDED KMQCVATCPT PPLPPRCHVH GKSYRPGAVV PSDKNCQSCL1260
 1261 CTERGVECTY KAEACVCTYN GQRFHPGDVI YHTTDGTGGC ISARCGANGT IERRVYPCSP1320
 1321 TTPVPPTTFS FSTPPLVVSS THTPSNGPSS AHTGPPSSAW PTTAGTSPRT RLPTASASLP1380
 1381 PVCGEKCLWS PWMDVSRPGR GTDSGDFDTL ENLRAHGYRV CESPRSVECR AEDAPGVPLR1440
 1441 ALGQRVQCSP DVGLTCRNRE QASGLCYNYQ IRVQCCTPLA CSTSSSPAQT TPPTTSKTTE1500
 1501 TRASGSSAPS STPGTVSLST ARTTPAPGTA TSVKKTFSTP SPPPVPATST SSMSTTTPGT1560
 1561 SVVSSKPTLT EPSTSSCLQE LCTWTEWIDG SYPAPGINGG DFDTFQNLRD EGYTFCESPR1620
 1621 SVQCRAESFP NTPLADLGQD VICSHTEGLI CLNKNQLPPI CYNYEIRIQC CETVNVCRDI1680
 1681 TRPPKTVATT RPTPHPTGAQ TQTTFTTHMP SASTEQPTAT SRGGPTATSV TQGTHTTPVT1740
 1741 RDCHPRCTWT KWFDVDFPSP GPHGGDKETY NNIIRSGEKI CRRPEEITRL QCRAKSHPEV1800
 1801 SIEHLGQVVQ CSREEGLVCR NQDQQGPFKM CLNYEVRVLC CETPRGCHMT STPGSTSSSP1860
 1861 AQTTPSTTSK TTETQASGSS APSSTPGTVS LSTARTTPAP GTATSVKKTF STPSPPPVPA1920
 1921 TSTSSMSTTA PGTSVVSSKP TPTEPSTSSC LQELCXXXEL LQALFPAPHN LWSWNYSQPC1980
 1981 SHHQHNLCSY NQNNLCLYSQ HNLWSWKYSQ PCSHHQHNLC SYNQNNPCLY SQHNLCTTSG2040
 2041 PGTSLSPVPT TSTTSAPTTS TTSGPGTTPS PVPTTSTTSA PTTSTTSGPG TTPSPVPTTS2100
 2101 TTPTTHSQPV TSDCHPLCAW TKWFDVDFPS PGPHGGDKET YNNIIRSGEK ICRRPEEITR2160
 2161 LQCRAESHPE VNIEHLGQVV QCSREEGLVC RNQDQQGPFK MCLNYEVRVL CCETPRGCPV2220
 2221 TSVTPYGTSP TNALYPSLST SMVSASVAST SVASSSVASS SVAYSTQTCF CNVADRLYPA2280
 2281 GSTIYRHRDL AGHCYYALCS QDCQVVRGVD SDCPSTTLPP APATSPSIST SEPVTELGCP2340
 2341 NAVPPRKKGE TWATPNCSEA TCEGNNVISL RPRTCPRVEK PTCANGYPAV KVADQDGCCH2400
 2401 HYQCQCVCSG WGDPHYITFD GTYYTFLDNC TYVLVQQIVP VYGHFRVLVD NYFCGAEDGL2460
 2461 SCPRSIILEY HQDRVVLTRK PVHGVMTNEI IFNNKVVSPG FRKNGIVVSR IGVKMYATIP2520
 2521 ELGVQVMFSG LIFSVEVPFS KFANNTEGQC GTCTNDRKDE CRTPRGTVVA SCSEMSGLWN2580
 2581 VSIPDQPACH RPHPTPTTVG PTTVGSTTVG PTTVGSTTVG PTTPPAPCLP SPICQLILSK2640
 2641 VFEPCHTVIP PLLFYEGCVF DRCHMTDLDV VCSSLELYAA LCASHDICID WRGRTGHMCP2700
 2701 FTCPADKVYQ PCGPSNPSYC YGNDSASLGA LPEAGPITEG CFCPEGMTLF STSAQVCVPT2760
 2761 GCPRCLGPHG EPVKVGHTVG MDCQECTCEA ATWTLTCRPK LCPLPPACPL PGFVPVPAAP2820
 2821 QAGQCCPQYS CACNTSRCPA PVGCPEGARA IPTYQEGACC PVQNCSWTVC SINGTLYQPG2880
 2881 AVVSSSLCET CRCELPGGPP SDAFVVSCET QICNTHCPVG FEYQEQSGQC CGTCVQVACV2940
 2941 TNTSKSPAHL FYPGETWSDA GNHCVTHQCE KHQDGLVVVT TKKACPPLSC SLDEARMSKD3000
 3001 GCCRFCPPPP PPYQNQSTCA VYHRSLIIQQ QGCSSSEPVR LAYCRGNCGD SSSMYSLEGN3060
 3061 TVEHRCQCCQ ELRTSLRNVT LHCTDGSSRA FSYTEVEECG CMGRRCPAPG DTQHSEEAEP3120
 3121 EPSQEAESGS WERGVPVSPM H

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