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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BUD8
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQSDEDNLD SSETTASTSY SGTSSVSSRL QLRTSLFFEN LNGAHGNPDA ETEMATVAYE  60
   61 TTSRGQGFAV YINNERFSQI MGASTSSSSS SNSSSITQFH DTQDNNIPSN TTVRPTSLRR 120
  121 DNEDTVPLRN VTPSQNAAVR PERAVNSPSS QRLSCALTIS TSVLMGEDVE GSPIEQEHSR 180
  181 VVSSLYSSLA NRGNDESKNG TPPRPTSIEP NETTEHSFFS YHYDDTLEPD VEEAVRLTKN 240
  241 KTSNVNFISS TGSKGEGETE DEVIDQYEPV NESKFIPHKL KIPEKAGSIK SSTSDDSHSP 300
  301 GAPGTSARKI KIPQSPSLIG NILIPSHNSD SSNESSPKDH IGHNNEEKFS SKSTRKPSTS 360
  361 LEEEGPPIGL PSIPVLRSVS GPSKWTKTPL RLESGNSTKS DPFSRYEGHK TPSPLTKMNK 420
  421 KKNKTLPEHG QPLVLAPIKS QSSESDTGQN SIIEKPARSI RRKQQEKTDN RKEDRHDAEN 480
  481 IDLEARMPIQ HIDTASIHSF DSGQNGFRDV YSIENIIVIL LCCSIVPPLF FIIGCSSRRK 540
  541 LVSDYRLMRL LMNKEHRAAL LQGFIWDVDL RWFRMFCLIL GAAETVIVMA GIAIGFGVGI 600
  601 TRE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle