YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DIC1
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTNAKESAG KNIKYPWWYG GAAGIFATMV THPLDLAKVR LQAAPMPKPT LFRMLESILA  60
   61 NEGVVGLYSG LSAAVLRQCT YTTVRFGAYD LLKENVIPRE QLTNMAYLLP CSMFSGAIGG 120
  121 LAGNFADVVN IRMQNDSALE AAKRRNYKNA IDGVYKIYRY EGGLKTLFTG WKPNMVRGIL 180
  181 MTASQVVTYD VFKNYLVTKL DFDASKNYTH LTASLLAGLV ATTVCSPADV MKTRIMNGSG 240
  241 DHQPALKILA DAVRKEGPSF MFRGWLPSFT RLGPFTMLIF FAIEQLKKHR VGMPKEDK

Type	Start	End	Confidence
Cytoplasmic	1	14	0.65
Transmembrane Helix	15	36	0.79
Non-Cytoplasmic	37	105	0.50
Transmembrane Helix	106	126	0.71
Cytoplasmic	127	207	0.53
Transmembrane Helix	208	230	0.48
Non-Cytoplasmic	231	263	0.67
Transmembrane Helix	264	283	0.67
Cytoplasmic	284	298	0.62