YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89033529
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWQLLAAACW MLLLGSMYGY DKKGNNANPE ANMNISQIIS YWGYPYEEYD VTTKDGYILG  60
   61 IYRIPHGRGC PGRTAPKPAV YLQHGLIASA SNWICNLPNN SLAFLLADSG YDVWLGNSRG 120
  121 NTWSRKHLKL SPKSPEYWAF SLDEMAKYDL PATINFIIEK TGQKRLYYVG HSQGTTIAFI 180
  181 AFSTNPELAK KIKIFFALAP VVTVKYTQSP MKKLTTLSRR VVKVLFGDKM FHPHTLFDQF 240
  241 IATKVCNRKL FRRICSNFLF TLSGFDPQNL NMSRLDVYLS HNPAGTSVQN MLHWAQAVNS 300
  301 GQLQAFDWGN SDQNMMHFHQ LTPPLYNITK IEVPTAIWNG GQDIVADPKD VENLLPQIAN 360
  361 LIYYKLIPHY NHVDFYLGED APQEIYQDLI ILMEEYLQN

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	399	0.99