YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YLR326W
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGFIKSTLL GLGQDYLEDQ YQEFAEQHFQ PTRDPFYETN KDGKKHRRRL PYYCTKDESK  60
   61 AWKKVQNKAW LHDKSLCGCC CWTNTIGWAP LLALLPVIGP LLMYWVHDKL IELADDRYKL 120
  121 PAEIKVKMHG NIVIDLLISL VPILGSVFAW LHACSTRNAA IVYNFVGKRA LERKQAELMH 180
  181 QKEENEKHSN ANTAPPVVGG NKNVNGNRNN SKMYNRPPVT APPAPAYTRS TNGRPQRGYR 240
  241

Type	Start	End	Confidence
Cytoplasmic	1	77	0.91
Transmembrane Helix	78	98	0.78
Non-Cytoplasmic	99	131	0.81
Transmembrane Helix	132	154	0.82
Cytoplasmic	155	240	0.86