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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PEX30
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGNTTNVHE TRAKFAETLQ PRIGGNTTKV IRAALEKNEA ESGVSEDNDN GSLEKVNVAT  60
   61 SPLLTSTPPT ISKALVKLYP YLILIDEFLN VVTWTGKNIW SSVLMLCLFI TTVEYFETLV 120
  121 KYFGHLAIIA ILWGYSLLDN YIEGTLSSSP TLEDIALLMN RVSLKSDILL SPMVNLGTQD 180
  181 IQRLLYTTVI LSPIYVMITW LLLPPRSLML MVGMFLLTYH SPWSKVARRL LWKFKIVRLL 240
  241 VFYVTGLDLG GINKDQGIFA TVQKQVKKLA STENSNGVLS DSKPIRFTYV LYENQRRWLG 300
  301 IGWKPSMLSY ERTPWTDEFL NEAPSPENFH LPEETNTMVW RWVDKTWRLD MTNDGAIQVP 360
  361 NSKARTSADP SPDEGFIYYD NTWKKPSKED SFSKYTRRRR WVRTAELVKT SDFDESVINS 420
  421 NRNSAIEQKV EENSTNGLTA EQELGSNKQE KDNAKKVGEP TTEETKEFAE ASNINEGEFE 480
  481 RISSTDEEVL KSRARDRLAK VLDDTEEKEQ SNPTIGRDSK KAV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle