YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113420279
Protein type:	Transmembrane
Type Confidence:	0.61
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSESVTDG GGQNDVPGPC PRSTHPVSAG ATRQPQLCGN ILAAPGALSP VTPTPAAPPT  60
   61 ASAEYILQPD GVKALMVSSN LAQAHFNILW KFKCMCMREQ FQPRLHWKST LVEIHGKIDW 120
  121 GGGHGWLQPQ TTAPQPKGCQ GKQQPHQNQG TPRNLTLMCP LPPTVKLLGC YRSGTHCFLI 180
  181 GAADFTALQQ RPPLARLEMP LASLRLRETL QLSLHCPKSS TARCLLPSHR AAGEVLCIRP 240
  241 AGPALCTTLP WQQWLPGLHT GLGNLAVTTV MRTLTLLSAF LLVALQAWAE PLQARAHEMP 300
  301 AQKQPPADDQ DVVIYFSGDD SCSLQVPGST KGLICHCRVL HCLFGEHVGG TCFILGERYP 360
  361 ICCY

Type	Start	End	Confidence
Non-Cytoplasmic	1	268	0.56
Transmembrane Helix	269	289	0.52
Cytoplasmic	290	364	0.50