YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YLR283W
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.66
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRLIRTLPL RCFKTRIRRQ GSLLCLRCFS SYSKPLLQKS MSLKNIQLSD LSSSPLSKNK  60
   61 EKQEKPEKEN EGKHSIGLLD RFSEDFITQG NGLKPTTSQN QLDTIKFYQM LRERGNFSDE 120
  121 QCKIIIALLL QLLNDQFYSC YNDLFLRDME LNKQSHLFSS LETELKFAIQ NSRDTQLNEH 180
  181 HLQLLKLKRE LNSIHDELNE IIIDLLQKDA KLEFNNQKLE NTLLYRQLNL KLNDCSNKIQ 240
  241 TKILGDIRSH IENLRWQTTR SGLLVILVLV CSIMIGVSAS KKERPGLQEP EEPEILAPKE 300
  301 DIDTTFPQDQ HDID

Type	Start	End	Confidence
Signal Peptide	1	33	0.77
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	260	0.92
Transmembrane Helix	261	279	0.80
Cytoplasmic	280	314	0.77