YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|151941103
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKSTLIYRE DGLPLCTSVD NENDPSLFEQ KQKVKIVVSR LTPQSATEAT LESGSFEIHY  60
   61 LKKSMVYYFV ICESGYPRNL AFSYLNDIAQ EFEHSFANEY PKPTVRPYQF VNFDNFLQMT 120
  121 KKSYSDKKVQ DNLDQLNQEL VGVKQIMSKN IEDLLYRGDS LDKMSDMSSS LKETSKRYRK 180
  181 SAQKINFDLL ISQYAPIVIV AFFFVFLFWW IFLK

Type	Start	End	Confidence
Cytoplasmic	1	188	0.58
Transmembrane Helix	189	213	0.87
Non-Cytoplasmic	214	214	0.58