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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113415205
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRYRHDPRT CSPSRSLATA FGPSNLGSPN TACPAPFPWR RAAKQRERAL LSGFEPPTPQ  60
   61 VSRKRLPPGP VGPPRPGPVP AQGGAGPARS SPRPASPGRV CRRAGESRRW ARLGAQVAAA 120
  121 ERSQPLPYPE QPAGAVQSGD TLGVPAGQPG QPRSRDSAVS AAGINPLYAC LLGLCALLPR 180
  181 FAGLNICTSG SATSCEECLL IHPKCAWCSK EDFGSPRSIT SRCDLRANLV KNGCGGEIES 240
  241 PASSFHVLRS LPLSSKGSGS AGWDVIQMTP QEIAVNLRPG DKTTFQLQVR QVEDYPVDLY 300
  301 YLMDLSLSMK DDLDNIRSLG TKLAEEMRKL TSNFRLGFGS FVDKDISPFS YTAPRYQTNP 360
  361 CIGYKLFPNC VPSFGFRHLL PLTDRVDSFN EEVRKQRVSR NRDAPEGGFD AVLQAAVCKE 420
  421 KIGWRKDALH LLVFTTDDVP HIALDGKLGG LVQPHDGQCH LNEANEYTAS NQMDYPSLAL 480
  481 LGEKLAENNI NLIFAVTKNH YMLYKNFTAL IPGTTVEILD GDSKNIIQLI INAYNSIRSK 540
  541 VELSVWDQPE DLNLFFTATC QDGVSYPGQR KCEGLKIGDT ASFEVSLEAR SCPSRHTEHV 600
  601 FALRPVGFRD SLEVGVTYNC TCGCSVGLEP NSARCNGSGT YVCGLCECSP GYLGTRCECQ 660
  661 DGENQSVYQN LCREAEGKPL CSGRGDCSCN QCSCFESEFG KIYGPFCECD NFSCARNKGV 720
  721 LCSGHGECHC GECKCHAGYI GDNCNCSTDI STCRGRDGQI CSERGHCLCG QCQCTEPGAF 780
  781 GEMCEKCPTC PDACSTKRDC VECLLLHSGK PDNQTCHSLC RDEVITWVDT IVKDDQEAVL 840
  841 CFYKTAKDCV MMFTYVELPS GKSNLTVLRE PECGNTPNAM TILLAVVGSI LLVGLALLAI 900
  901 WKLLVTIHDR REFAKFQSER SRARYEMASN PLYRKPISTH TVDFTFNKFN KSYNGTVD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle