YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YLR152C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	15	0.54
Transmembrane Helix	16	35	0.77
Non-Cytoplasmic	36	71	0.64
Transmembrane Helix	72	95	0.91
Cytoplasmic	96	102	0.80
Transmembrane Helix	103	124	0.87
Non-Cytoplasmic	125	140	0.92
Transmembrane Helix	141	162	0.89
Cytoplasmic	163	394	0.98
Transmembrane Helix	395	415	0.87
Non-Cytoplasmic	416	444	0.86
Transmembrane Helix	445	465	0.91
Cytoplasmic	466	476	0.82
Transmembrane Helix	477	497	0.89
Non-Cytoplasmic	498	515	0.87
Transmembrane Helix	516	537	0.61
Cytoplasmic	538	545	0.57
Transmembrane Helix	546	570	0.84
Non-Cytoplasmic	571	576	0.64

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSLGAAIY IALKPIFKIY TIMLVGYLVA KFDIVSMENA KGISNMVVNA ILPCLTFNKI  60
   61 VSNISWRDIK EIGVIILSAF ILFVLGATGA LFTTFATTVP KKFFWGLIFA GFFPNISDLP 120
  121 IAYIQSMGNG SIFTAEEADK GVAYSCIFLF IQSFLMMNFG MWRVVGLDFR DTKEPDSENI 180
  181 TPSVSPAIDD RKLTEITKLP NITRPTNAYQ SEDARSNSDL SCNSITTNEM TPQAFYEGFT 240
  241 GYIKPYKESN GASHKFESDL PHAEIYRVSS TYSSPGALEF SRIDGSSLSY SRISKNSDGR 300
  301 SYRRKRKADM NELISKYSAA EKIRQGELDL SRPLSLTEEV GSRNASIGNV HTGYTDESSI 360
  361 EEENCTNMAT DGRGSLSFFI ERHNLKWLQY FIINCLRPAS LGAILGIICA LIPWVKACFV 420
  421 TTYVHVHKAP DGEPVLNFLM DFTEYIGNAC VPLGLLLLGG TLARLEIKSL PPGFIKSALL 480
  481 MTCFRLIVIP IIGVLWVNKL YSIDWLDTGI GKFDMILTWS MPSATAQVYF TAFYTPACGD 540
  541 HIQMNCLSVL FVMQYAILFI TVAFVVTYTL KVDLKV