YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190406151
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGLRVAAKI QPARQTIIFL HGLGDTGSGW GFLAQYLQQR DPAAFQHTNF VFPNAPELHV  60
   61 TANGGALMPA WFDILEWDPS FSKVDSDGFM NSLNSIEKTV KQEIDKGIKP EQIIIGGFSQ 120
  121 GAALALATSV TLPWKIGGIV ALSGFCSIPG ILKQHKNGIN VKTPIFHGHG DMDPVVPIGL 180
  181 GIKAKQFYQD SCEIQNYEFK VYKGMAHSTV PDELEDLASF IKKSLSS

Type	Start	End	Confidence
Cytoplasmic	1	16	0.65
Transmembrane Helix	17	34	0.59
Non-Cytoplasmic	35	227	0.71