YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YLR065C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGKAGRKQA SSNAKIIQGL YKQVSLFLGM AIVRLFISRK VTIGQWIKLV ALNVPMFVAL  60
   61 YIIVLSGKPK YDGNRVVKQG IDLNDNTNLI SYFFDLIYLS LFGNIGIIAF RTFKFWWCLL 120
  121 LCPIYAGYKL YGLKNMFMPG AQQTQADNRS KNANEGQSKS KRQMKRERRG ETDSKIKYKY 180
  181 R

Type	Start	End	Confidence
Cytoplasmic	1	18	0.76
Transmembrane Helix	19	38	0.79
Non-Cytoplasmic	39	45	0.53
Transmembrane Helix	46	67	0.88
Cytoplasmic	68	87	0.56
Transmembrane Helix	88	109	0.74
Non-Cytoplasmic	110	112	0.43
Transmembrane Helix	113	132	0.63
Cytoplasmic	133	181	0.76