YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YLR064W
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVPRNRPMA PFGTIIKSRI KQPQFYWFIG HFLTIFNFIQ FHLSITSKQN QLSCYRRSLF  60
   61 YISVTYAIVL YQFFKSDQLK FNFTLLRQEM KKLDNLQYFA MLFILFLLSQ FNIIISGSLY 120
  121 SPVIFSIFHF LNYFKENLLP FLPLIPLNLK NLLNSKITVF IQNYNGFFLQ MAQVFEIICG 180
  181 LRVGLFLVPF NFFLLLVRRA NVSFEVVGTM LAGLTYVWFF KLRYLQSESM RQIFKQYVLR 240
  241 LDAYVSRTLP PYCSRLWNGY KNFVMTVFWK IPV

Type	Start	End	Confidence
Cytoplasmic	1	24	0.93
Transmembrane Helix	25	45	0.90
Non-Cytoplasmic	46	56	0.78
Transmembrane Helix	57	74	0.91
Cytoplasmic	75	94	0.90
Transmembrane Helix	95	120	0.84
Non-Cytoplasmic	121	171	0.80
Transmembrane Helix	172	195	0.84
Cytoplasmic	196	201	0.66
Transmembrane Helix	202	220	0.89
Non-Cytoplasmic	221	273	0.73