YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91784432, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.60
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWTRDEMAA RAAKELQDGF YVNLGIGLPT LVANHVPAGV EVWLQSENGL LGIGPSPTEE  60
   61 EVDADLINAG KQTVTTLPGS SIFSSADSFA MIRGGHINLA ILGAMQISKK GDLANWMIPG 120
  121 KMIKGMGGAM DLVAGVKRVV VLMEHVAKGD QHKILEECTL PLTGVGVVDQ IITDLGVIEI 180
  181 TEDGLKVTEL APGVSVEEIK AKTGAPLDVS AVS

Type	Start	End	Confidence
Cytoplasmic	1	19	0.57
Transmembrane Helix	20	38	0.56
Non-Cytoplasmic	39	213	0.76