YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190406080
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFAPSFSLI KNILLVSFLI SHSFAAKTLT SSSNDDTLAR SAAADADMAF FMEFLNDFDT  60
   61 AFPQYTSYMM QNHLTLPQPV ADYYYHMVDL ASTADLQSDI AQSFPFTQFQ TFITAFPWYT 120
  121 SLLNKASATT IYLPQHFITG ETEATMTNSS YASQKNSVSN SVPFSTANAG QSMISMANEE 180
  181 NSTTALISAS NSSSTSRTSQ SQNGAHAKSL YFPMALFGIF AVAL

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	224	0.97