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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YLR001C
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.77
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMAIQTIKY IFWLLPILGL TQALLQNPGD DFPFSTVIDI LSENVEFSTF LRIIQKTGHV  60
   61 QYLNELQNFT LFAPINSAFI KGDQTTDQFE EHFHIEDFLI HDRVLQVRDL ENGTYLEKRA 120
  121 AKAPLLLRKH ERHCFVNEIA VVEPDLLPSF QNASLQGINN LLLIQPQINE LLVQLDEETQ 180
  181 DLKIFSDFIS SFSNYNAYTN SSTVLVPLDV NFRKFFNTIE INYLLDKYNK LGKSNTISQA 240
  241 KWAADRTSLL QELIIDDVYG GILPKELILE NKNNRKLFMK SNSEGTSVSV NNSDYSPISN 300
  301 RIFEIGVVHG FSDLDFLRTH IQFDAEKYLH GLNCSEFVKE LYFRDLEKFI QNGRKITIFV 360
  361 PQASFNEDRG YTKPSLLYHF VEGKIDLEQD FSSLRPIQYA PTQIYDSAFC SSAKRLGGHC 420
  421 QKFKITRSNK GYYINGRFKI LNTKPYEIGN TSIYSIDDDL QLPGDLVLSL APENHCSISL 480
  481 MLLKELNLLD LPSNHKGYTI LLPCMNSWDN NDLTIDYLRS NKTALNLLMR NLIFEDLIYS 540
  541 NNYSISTTVK NLYGNSVSIG VQKIVGSQNL TKISVSTIKE SIIIEESSDI FFNQGVIHPI 600
  601 DQLDFPVDLE ISLKELIETT GTKEIFDFFN LFYDLSSIIW NNEEYSLLVP TASSIPLSGI 660
  661 TANSTNLRKF LELHLIPANV TQNLLDCNGS ISTKLGTKLN CRKDHLDNVF VSIQGDWTKE 720
  721 VRVLKTGCTT NLKSSCIFLI DKPISLSWLN SEKYHLRLPG IAVGFGVIIG VTIAISLLFC 780
  781 IIITRGGKVK DKNQRGRNDR ATTPLIQHSP IIHNPSYSAT AHLSPLSQPT FEGSYSVNAI 840
  841 QTPRDIRRVG SDQKGGRSVS TS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle