YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YLL053C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWFPQIIAGM AAGGAASAMT PGKVLFTNAL GLGCSRSRGL FLEMFGTAVL CLTVLMTAVE  60
   61 KRETNFMAAL PIGISLFMAH MALTGYTGTG VNPARSLGAA VAARYFPHYH WIYWISPLLG 120
  121 AFLAWSVWQL LQILDYTTYV NAEKAAGQKK ED

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.72
Transmembrane Helix	6	27	0.87
Cytoplasmic	28	38	0.67
Transmembrane Helix	39	59	0.93
Non-Cytoplasmic	60	66	0.69
Transmembrane Helix	67	90	0.88
Cytoplasmic	91	109	0.69
Transmembrane Helix	110	129	0.93
Non-Cytoplasmic	130	152	0.72