YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	POM33_YEAST
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSRPANNQG PPNLPARDKS LVQRFMAVAK SLQFAWFTGH SVVLISSILY LLKMSEFYYR  60
   61 SAYLGVIESF GIIIYQQFFT RNEPLQTQDA AATKASIKSR VAGLLKSEDV LYLVLANFWL 120
  121 FTPRFSFSLI PFFAFAVFHV LIYVEKVLLP KVFHLSSKDS SKILSFIDKF VVQYNDLCMH 180
  181 WVGTAELLIF ILVLFRAILC FQRSWIILVV YAIFIKLRYE NSKYMKAAFA QWRVRMDGII 240
  241 SHPSIPPFVK RAYNAIKMSL IRLSEYRLSG APQVTKKQN

Type	Start	End	Confidence
Cytoplasmic	1	31	0.71
Transmembrane Helix	32	52	0.88
Non-Cytoplasmic	53	58	0.58
Transmembrane Helix	59	79	0.63
Cytoplasmic	80	120	0.66
Transmembrane Helix	121	143	0.83
Non-Cytoplasmic	144	176	0.65
Transmembrane Helix	177	200	0.71
Cytoplasmic	201	279	0.76