YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SKG1
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTASTSVAVG CAVGIPVGVG IIIAVCFWFN LQKRYKREEQ DDRELERAIY DESGFVSFDN  60
   61 FGPLRDSKDE AALASSELKN PDHTSGSSEG SAHPEEKDGK SRDQEKPLGK KNSKYYVPAY 120
  121 RRKINLLQVR NNNYGNNARQ KSVVDLPSIN NSSNVSLSSS QRHITKRQIS VYDQMVPVIS 180
  181 DEGPNFFADP SSDTNTSNDQ NKASMIELKH NTRQSSNENL IRNLQNQDFG SYYQGELHPR 240
  241 F

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.64
Transmembrane Helix	7	29	0.92
Cytoplasmic	30	241	0.68