YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PAM17
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTSAIRLSS QRLFASQPSV TAAALRSTAT TLPLRSYSQP ASLQDSSILT WSDFFKLRKQ  60
   61 QRRINVGSSL FTALLGCNVS WAYLSTMEID PTQMLFGFDP LTVISAGIIA SGALGYLLGP 120
  121 IVGSQVFKLS HNQQLAQFNN KNKEFLKHII NNRVDASSQS FSNPVPDYYG EKIGSLKEYK 180
  181 QWLRDCHAYA KKAKEFL

Type	Start	End	Confidence
Cytoplasmic	1	63	0.97
Transmembrane Helix	64	84	0.93
Non-Cytoplasmic	85	100	0.85
Transmembrane Helix	101	122	0.88
Cytoplasmic	123	197	0.97