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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TRK2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTAKRTSSR ASLALPFQLR LVHKKSWGHR LRDFISGFLK SCRPIAKYVF PNFIVVHYIY  60
   61 LITLSIIGSI LLYPCKNTAF IDVLFLAAGA STQGGLATKS TNDFNLYQQI VVYVITLLST 120
  121 PILIHGFLAF VRLYWFERYF DNIRDISKQN FKLRRTMTLQ QRELSGSSGN AARSRSFKDN 180
  181 LFRGKFVSRE DPRQSASDVP MDSPDTSALS SISPLNVSSS KEESSDTQSS PPNFSSKRQP 240
  241 SDVDPRDIYK SIMMLQKQQE KSNANSTDSF SSETNGPAFI VQERHERRAP HCSLKRHSVL 300
  301 PSSQELNKLA QTKSFQKLLG LRRDEGDHDY FDGAPHKYMV TKKKKISRTQ SCNIPTYTAS 360
  361 PSPKTSGQVV ENHRNLAKSA PSSFVDEEMS FSPQESLNLQ FQAHPPKPKR REGDIGHPFT 420
  421 RTMSTNYLSW QPTFGRNSVF IGLTKQQKEE LGGVEYRALR LLCCILMVYY IGFNILAFVT 480
  481 IVPWACTRHH YSEIIRRNGV SPTWWGFFTA MSAFSNLGLS LTADSMVSFD TAPYPLIFMM 540
  541 FFIIIGNTGF PIMLRFIIWI MFKTSRDLSQ FKESLGFLLD HPRRCFTLLF PSGPTWWLFT 600
  601 TLVVLNATDW ILFIILDFNS AVVRQVAKGY RALMGLFQSV CTRTAGFNVV DLSKLHPSIQ 660
  661 VSYMLMMYVS VLPLAISIRR TNVYEEQSLG LYDSGQDDEN ITHEDDIKET DHDGESEERD 720
  721 TVSTKSKPKK QSPKSFVGAH LRRQLSFDLW YLFLGLFIIC ICEGRKIEDV NKPDFNVFAI 780
  781 LFEVVSAYGT VGLSLGYPNT NTSLSAQFTV LSKLVIIAML IRGRNRGLPY TLDRAIMLPS 840
  841 DKLEQIDRLQ DMKAKGKLLA KVGEDPMTTY VKKRSHKLKK IATKFWGKH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle