YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	UTH1
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCFLLETSAS PRSKLSKDFK PQFTLLSSVT KKKKKKVRPH NFQCIHSLNF VYFLFIHSFL  60
   61 FEYNQLLVLP LNKNLPSLNF SRNSSMKLSA LLALSASTAV LAAPAVHHSD NHHHNDKRAV 120
  121 VTVTQYVNAD GAVVIPAATT ATSAAADGKV ESVAAATTTL SSTAAAATTS AAASSSSSSS 180
  181 SSSSSSSSVG SGDFEDGTIS CSDFPSGQGA VSLDWLGLGG WASIMDMNGN TATSCQDGYY 240
  241 CSYACSPGYA KTQWPSEQPS DGRSVGGLYC KNGKLYRSNT DTNSLCVEGQ GSAQAVNKVS 300
  301 GSIAICGTDY PGSENMVVPT VVGAGSSQPI NVIKEDSYYQ WQGKKTSAQY YVNNAGVSVE 360
  361 DGCIWGTEGS GVGNWAPVVL GAGYTDGITY LSIIPNPNNK EAPNFNIKIV ATDGSTVNGA 420
  421 CSYENGVYSG SGSDGCTVSV TSGSANFVFY

Type	Start	End	Confidence
Cytoplasmic	1	41	0.89
Transmembrane Helix	42	61	0.79
Non-Cytoplasmic	62	87	0.82
Transmembrane Helix	88	108	0.65
Cytoplasmic	109	152	0.58
Transmembrane Helix	153	173	0.50
Non-Cytoplasmic	174	450	0.85