YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	OPI8
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFQPLNALS LCASLSSFSS STLTSFAFIS GTLSSFALCF NSMPFSSATL LISSSTLSLS  60
   61 TSMASEFTPI SSYTLTLVSK SSNCCSNLSI IMVICWRFIF CNALSMPLQT CPIDADTCLI 120
  121 VTAVCTLDAT ESTRDANFNS CNLSFFFLIA LDAYIRDISS FSLRARLSLL VSCFSSFEAL 180
  181 LACFCNCFDV NFSWKRVFSK PAAELRDISQ CDV

Type	Start	End	Confidence
Signal Peptide	1	27	0.82
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	213	0.83