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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113205252, gi...
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGKNSGDNR TRTSVSIFII AGLCCFFYLL GAWQRSGFGK GDSIAVAVTK TAGENCDILP  60
   61 NLNFETRHAG EAGGTDESEE VEELKPCDPQ YTDYTPCQDQ KRAMTFPREN MNYRERHCPP 120
  121 QEEKLHCLIP APKGYVTPFP WPKSRDYVPY ANAPYKSLTV EKAIQNWVQY EGNFFRFPGG 180
  181 GTQFPQGADK YIDQLASVVP IENGTVRTAL DTGCGVASWG AYLWKRNVIA MSFAPRDSHE 240
  241 AQVQFALERG VPAVIGVLGT IKMPYPSKAF DMAHCSRCLI PWGAADGILM MEVDRVLRPG 300
  301 GYWVLSGPPI NWKVNFKAWQ RPKEDLEEEQ RKIEEAAKLL CWEKISEKGE TAIWQKRKDS 360
  361 ASCRSAQENS AARVCKPSDP DSVWFPLEHV KKVQYVNLNC LGGRKFTKYA GQSICHNMIR 420
  421 YNKMEMCITP NTGNGGDESL KPFPERLYAV PPRIANGLVS GVSVAKYQED SKKWKKHVSP 480
  481 YKKINKLLDT GRYRNIMDMN AGLGGFAAAL HSPKFWVMNV MPTIAEKNTL GVIFERGLIE 540
  541 TLISPGSMCF VYMLELRSIL PPKCEAFSTY PRTYDLIHAS GLFSLYKDKC EFEDILLEMD 600
  601 RILRPEGAVI LRDNVDVLIK VKKIIGGMRW NFKLMDHEDG PLVPEKILVA VKQYWTLGDT 660
  661 NSTSSQ

YRC Informatics Platform - Version 3.0
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