YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|207343423
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFSKVSLLA ASASVALSAP VAVTVTQHVH QAATVVVQGI VRVENGQTLT TFITKGTQTA  60
   61 SASPVATTSA PIVVANAQVD SIATSVIQES AVVAESATFE ESSTETSEAF STATATIQAV 120
  121 QTSASATQDD VTTTLTSSTQ PTSTTTPTTT TTSPTTTTSP TTTASPTTTA SPTTATTTQS 180
  181 TASSTQSSSS DFSTSMVNEH NTKRALHKDT GSLTWSDTLA TYAQNYADSY DCSGNLVHSG 240
  241 GPYGENLALG YGTTGSVDAW YNEITSYDYS NPGFSESAGH FTQVVWKGTS EVGCGLKSCG 300
  301 GEWGDYIICS YKAAGNVIGE FADNVMPLA

Type	Start	End	Confidence
Signal Peptide	1	24	0.94
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	329	0.99