YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG34357-PB
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLTTCQIAK VFPLLTAFFF LNSPSAASLS FGLSPTFASA SASSSLSSSS SSSSHFHSEK  60
   61 PLHSDVLVLR AAKPSRAIAT SADAATRSVP ASAAETTLGS KSIWPTAIQT KSPRNAREAG 120
  121 RHKRQMQKPA IQQQPLQQQQ QRINPPQQKR QQQQQQQQQV QHQAQRVGVL IPPSLHVDLT 180
  181 HVQQGFQNFL DFFQLHLFNV TVDFLRDVDL SGFIKLLELP KYTSVIKTLN AGIMVASHVD 240
  241 VDQNSTIYIG TPSQPRQQHR LHSKQEQEPH RHHHEDSKAK QFPAGEEESH SSGETEENHW 300
  301 NDARIFSGHC HQLAEQLALD FNKTVVLWPC PRMKISSNFL PSFEAISLAV QSISTKLNWS 360
  361 QVDIYIGAAH RFIGLPEIEK NHLGDLDPGR TYLLVSMSAT ATLLEFTISS VASCCQKIAD 420
  421 QT

Type	Start	End	Confidence
Signal Peptide	1	27	0.98
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	422	0.98