YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YKL202W
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQYVKNDGN KYIIQMHRGK AIEMKRFMNF QSGSPTFNCC APPPASFFPL LRSSSFLPLP  60
   61 ASSFLHLHSS CFSLPASFFP LLRSSSFLHL HSSYFLHLHS SSFLLLPASS SLLLPSSFSP 120
  121 LPPASSFLLL PSFSSLLLPS FSSLPLPSFS FLLLPSSSFP LLPSSSSPLP PSSSSPSAFF 180
  181 LQVTWHKHSP RIQ

Type	Start	End	Confidence
Cytoplasmic	1	33	0.79
Transmembrane Helix	34	48	0.46
Non-Cytoplasmic	49	63	0.47
Transmembrane Helix	64	82	0.85
Cytoplasmic	83	94	0.47
Transmembrane Helix	95	118	0.81
Non-Cytoplasmic	119	126	0.43
Transmembrane Helix	127	154	0.71
Cytoplasmic	155	193	0.47