YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MIA40
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLWNTNYQ LEVGSIQRVY IISKMLRNLV VRNACRNRPS IQVARGLCRH QTRRLMASSP  60
   61 QFGRNSNQEK TAGFIMGILS MAGALYFIAP NRKPLFASRK VESDKTAEEE LSSGGEQSPE 120
  121 NEDDNNSKSD ENGDDNDSKN DETEAGPQLG GDKIGASKVA EDGELVVLAE EDNKSSEDKD 180
  181 TDESKVSTKD DEQSNEDNAT ANNQKDENIS SENSEENTSD KTLDNNAGSS EKKDPEHSDD 240
  241 EKSQQGQSDD KTTTEDNNGE EESSKKTVSD SENSAKQSES SDEEKEELRK QEEKQMGPTE 300
  301 EEVQHEGAYN PDTGEINWDC PCLGGMAHGP CGEEFKSAFS CFVYSEAEPK GIDCVEKFQH 360
  361 MQDCFRKYPE HYAEQLKETS DDEEPQDKVK VNTIESAPNV SSAKENAAKK AEQSDVKKEP 420
  421 LNEESKP

Type	Start	End	Confidence
Cytoplasmic	1	70	0.81
Transmembrane Helix	71	89	0.85
Non-Cytoplasmic	90	427	0.94