YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	STE3
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYKSAIIGL CLLAVILLAP PLAWHSHTKN IPAIILITWL LTMNLTCIVD AAIWSDDDFL  60
   61 TRWDGKGWCD IVIKLQVGAN IGISCAVTNI IYNLHTILKA DSVLPDLSSW TKIVKDLVIS 120
  121 LFTPVMVMGF SYLLQVFRYG IARYNGCQNL LSPTWITTVL YTMWMLIWSF VGAVYATLVL 180
  181 FVFYKKRKDV RDILHCTNSG LNLTRFARLL IFCFIIILVM FPFSVYTFVQ DLQQVEGHYT 240
  241 FKNTHSSTIW NTIIKFDPGR PIYNIWLYVL MSYLVFLIFG LGSDALHMYS KFLRSIKLGF 300
  301 VLDMWKRFID KNKEKRVGIL LNKLSSRKES RNPFSTDSEN YISTCTENYS PCVGTPISQA 360
  361 HFYVDYRIPD DPRKSQNKSK KYLFADKETD DILDEIDLKE SRHIPYVTQG QSFDDEISLG 420
  421 GFSKVTLDYS EKLHNSASSN FEGESLCYSP ASKEENSSSN EHSSENTAGP

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.59
Transmembrane Helix	6	25	0.92
Cytoplasmic	26	32	0.56
Transmembrane Helix	33	54	0.90
Non-Cytoplasmic	55	74	0.62
Transmembrane Helix	75	92	0.66
Cytoplasmic	93	116	0.82
Transmembrane Helix	117	136	0.92
Non-Cytoplasmic	137	161	0.89
Transmembrane Helix	162	184	0.93
Cytoplasmic	185	205	0.94
Transmembrane Helix	206	228	0.89
Non-Cytoplasmic	229	264	0.96
Transmembrane Helix	265	287	0.89
Cytoplasmic	288	470	0.98