YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YKL153W
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGKRNHQII HSSDLFLTLV GNSSGTSSGS FWVQVVRWLR WLQVFVQFED QWNTSWDVQL  60
   61 SNVSIRDTFQ VLNQTSQGVT VSGDHDGLTT QQVLGNDILP VWQQSVNDQS QRFSFWQDIW 120
  121 VNVLVSFITL LREWRRSVDW GRWNIEGSSV GVEFFFTELL QSFSLVLTL

Type	Start	End	Confidence
Cytoplasmic	1	14	0.58
Transmembrane Helix	15	33	0.63
Non-Cytoplasmic	34	115	0.88
Transmembrane Helix	116	132	0.51
Cytoplasmic	133	169	0.44