YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	VPH2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFEIKLNDRI TEFLRKFKNS AKSNEGIDED IDLFLKRHAI PMQSLLFYVK EYRKDSDLQC  60
   61 SIKELLKPLE FEFKPKAVRG LHYSEDFKKK LEFLKYQEQE LEYQSMVKRS KSVFSLQEDD 120
  121 ELTPSQINKQ IKEQVTTVFN VLVSVISVVV AIWYWTGSST NFPVHVRLLL CLFFGILVLV 180
  181 ADVVVYNSYL KKLEEAKVKE KTKVEKKKVL SKITL

Type	Start	End	Confidence
Cytoplasmic	1	135	0.98
Transmembrane Helix	136	156	0.95
Non-Cytoplasmic	157	163	0.88
Transmembrane Helix	164	186	0.91
Cytoplasmic	187	215	0.93