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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113205155
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGSEFPHAY PQTPSIDTSE TLFQRRSRCF CFPSFRSPNQ LTKYVKFDWW HRLRSGAVKE  60
   61 GSVWAKGINA LKKLREWSEI VAGPRWKTFI RRFHRNKSGN RNAKFQYDPL SYSLNFDEGR 120
  121 GNNGEEEEEL VLRNFSTRYA SIPASRKLGS EIRPKDQFLS PQPEGNTLVP NEIIYLTTLC 180
  181 IDEELGHLMK MTSKLQVHME MPKLADSGEL AGAGKRKAKR TDKSYEIYGE PKQIYQIQGM 240
  241 QTADNKMCEL DILHDSLYQF CPELHLKRLN SLTLACHALL DCKTLTLTEL GRNLPTKART 300
  301 KHNIKRIDRL LGNRHLHKER LAVYRWHASF ICSGNTMPIV LVDWSDIREQ KRLMVLRASV 360
  361 ALHGRSVTLY EKAFPLSEQC SKKAHDQFLA DLASILPSNT TPLIVSDAGF KVPWYKSVEK 420
  421 LGWYWLSRVR GKVQYADLGA ENWKPISNLH DMSSSHSKTL GYKRLTKSNP ISCQILLYKS 480
  481 RSKGRKNQRS TRTHCHHPSP KIYSASAKEP WILATNLPVE IRTPKQLVNI YSKRMQIEET 540
  541 FRDLKSPAYG LGLRHSRTSS SERFDIMLLI ALMLQLTCWL AGVHAQKQGW DKHFQANTVR 600
  601 NRNVLSTVRL GMEVLRHSGY TITREDSLVA ATLLTQNLFT HGYVLGKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle