YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190409766
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGDIRRKKD LLPRYKTGSK YNSRRRGGYL TTPMKKIIVY IILLCGVYFV IKVAYSDLNK  60
   61 ETEIKLESHS SDVSASASDH TNIAAGGAAD ATNNKQPQQA KVPKEKFNNE VAKQQEVKNL 120
  121 ENDLKPQIDS EKQKQINKDK KEQKQQLQKE KQDLAKENLA NNEILDN

Type	Start	End	Confidence
Cytoplasmic	1	35	0.53
Transmembrane Helix	36	55	0.67
Non-Cytoplasmic	56	167	0.83