YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YKL053W
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLSLYRRKN IAGPLPCVLI FITSKNCMYL FILSIRRKMN DGPRLWYFFR TLFFIGPFVV  60
   61 IIRLSLRVVV PLLQRRALYI IAVLIVVIAV VINMFFMSQL LPHFIGHNRR RYHAGTRPVL 120
  121 LLQK

Type	Start	End	Confidence
Cytoplasmic	1	10	0.76
Transmembrane Helix	11	33	0.87
Non-Cytoplasmic	34	45	0.66
Transmembrane Helix	46	66	0.93
Cytoplasmic	67	76	0.64
Transmembrane Helix	77	97	0.95
Non-Cytoplasmic	98	124	0.71