YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YKL044W
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYVIMTFSS ARMSERRARI IYIWMHLSAY KINFPFVQFP TFFSLFRLQK KAAILIKNPS  60
   61 PFFLFFLFPY RKNSTARTIH QINQAVALVL LCVSHHLTYL PSVPSL

Type	Start	End	Confidence
Cytoplasmic	1	19	0.95
Transmembrane Helix	20	39	0.88
Non-Cytoplasmic	40	52	0.73
Transmembrane Helix	53	70	0.73
Cytoplasmic	71	79	0.71
Transmembrane Helix	80	99	0.73
Non-Cytoplasmic	100	106	0.79