YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ILM1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQALNSTNI AFFRVAFLFT IAFFCLKNVN SILQNTYFIV LTQAMNLPQL TLSRYSGQLG  60
   61 LFALLFTLNG VHDLIPLLEN NVKYFQSVVP VRLLIFFILT SISYLWESNF YVHNNSVFIY 120
  121 CFAEVWINFL LYNAIREEKN EEFKRLNQFM VNDEDIEEPQ PFTVKTETTE IIEIINDEEN 180
  181 DDEDGKDNDD NNEKGNDDSD AKK

Type	Start	End	Confidence
Cytoplasmic	1	9	0.92
Transmembrane Helix	10	31	0.88
Non-Cytoplasmic	32	54	0.83
Transmembrane Helix	55	75	0.85
Cytoplasmic	76	87	0.77
Transmembrane Helix	88	106	0.93
Non-Cytoplasmic	107	115	0.77
Transmembrane Helix	116	135	0.87
Cytoplasmic	136	203	0.92