YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ABM1
Protein type:	Transmembrane
Type Confidence:	0.64
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWRYSILTV DGSFKIFIPW EIFLTWNFLS AAWLNSTESN TYIHYSTCWG TSDYTLNISV  60
   61 IEATTEKLVD TRLLTTLENA TAWINSNSID EDEDDMPHAT NVADRLDGLS LSKRVYSICH 120
  121 YEF

Type	Start	End	Confidence
Cytoplasmic	1	15	0.44
Transmembrane Helix	16	34	0.60
Non-Cytoplasmic	35	123	0.84