YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PEM2_YEAST
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKESVQEIIQ QLIHSVDLQS SKFQLAIVCT MFNPIFWNIV ARMEYHKHSL TKMCGGARKG  60
   61 CYMLAATIFS LGIVRDMVYE SALREQPTCS LITGENWTKL GVALFGLGQV LVLSSMYKLG 120
  121 ITGTYLGDYF GILMDERVTG FPFNVSNNPM YQGSTLSFLG IALYKGKPAG LVVSAVVYFM 180
  181 YKIALRWEEP FTAMIYANRD KAKKNM

Type	Start	End	Confidence
Cytoplasmic	1	20	0.53
Transmembrane Helix	21	41	0.68
Non-Cytoplasmic	42	59	0.35
Transmembrane Helix	60	79	0.60
Cytoplasmic	80	99	0.58
Transmembrane Helix	100	121	0.73
Non-Cytoplasmic	122	162	0.68
Transmembrane Helix	163	181	0.62
Cytoplasmic	182	206	0.75