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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YJR061W
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLSLRRFSM YVLRSLRLHF KKIIITLLTI QLLFITIFVL GGRSSIIDGN WKSFMALFFK  60
   61 PLAYTNRNNN HASFDLRSKD NVAKLYEKMN FDTSGKWIDT YTLKNNLLTV KMGPEKGQVL 120
  121 DSVDELRYYD NDPRLVWSVL LDHLLESDSN EYAFSWYDWA NFDSTNKLIA LRHTNISCQF 180
  181 VCEGAFDKNV LEMVESEVQE PLFVTNRNKY DESLWYNRVR KVVDSNSVQQ AIHDHCMNND 240
  241 AYSNGTPFEL PFIISEISER LRPEVYDLQA KNHLLYSNFT PLSLTVLDSD KDAYRINLKT 300
  301 TDSSKSNIVQ TNLLQNYIKR HRNEMVNGDL IFNHTSMFEK FLHHGSTKKR KLDVEALDKT 360
  361 IYAGEYLELS PSDFQFNAKE RIIELETRLR SEGLPSHDTH YLRSLKTSVN TSPALQQKYF 420
  421 AEASDITDAT ADGHHRDRRF FSIGHNLLND PQEFEARLNS LIRNFQKFVK ANGLISWLSH 480
  481 GTLYGYLYDG LKFPWDVDHD LQMPIKHLHY LSQYFNQSLI LEDPREGNGR FLLDVGSAIT 540
  541 VGVHGNGENN IDARFIDIDS GIYIDITGLS VSSDAAKQYM SKFVEEESSG ESFSALIEDY 600
  601 KFDENDYFDE VDGREGLAKY TIHELMEWVN SHPDDFTDAE KNLVTKTYKK ELAISRSDYA 660
  661 EKDLSPKQRY LVNEKYNLYN CRNQHFSSLN IISPLRNTMF SGVSAFVPNR PIATLNNEYK 720
  721 VPAKYGLLSF QGKVYLPEFR YWFSFADMKK FANLQLKEPK ITRLESPLND LKFSDISLLI 780
  781 TNILKCGFHS VFASLFNSFD STVYRLKELE IQYDPSLSEE EKSSLLKTLR RGMSKKIKSP 840
  841 EKDPIIYIYE RKLWENVEKL LNASNIYNIA SQVEKEKGKE FVERSQQVYE RNFDGFRLPD 900
  901 GGNSKTVNDL NSKGLNLFGD NKKTSNNIFG SDQKY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle