YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YJR038C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTNSRLCPS SPSSSLIKHL TTSGGPSTSL TIMLSVIAIR ILPAGMRNWI RQALGSLLFA  60
   61 SFLLLSSFHY PITLTLVPVY HESLVKPTSA SFGGIRLSQL TMIMERRATP TCQDPSLTEV 120
  121

Type	Start	End	Confidence
Non-Cytoplasmic	1	19	0.63
Transmembrane Helix	20	42	0.81
Cytoplasmic	43	52	0.58
Transmembrane Helix	53	73	0.88
Non-Cytoplasmic	74	120	0.56