YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YJR023C
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYILLYMVL LLLLLLLLLL LLLLLLLLQL YYFVFDSYTF SHITCSFSIL FLVSFSIGTF  60
   61 FSSIGARLSS FSASMRPTRA ISLPRSNCAL QMNSLLMRLK TLVMNRLVFL SKPFRLAMRH 120
  121 SPSTLIITTL LFK

Type	Start	End	Confidence
Cytoplasmic	1	8	0.78
Transmembrane Helix	9	31	0.88
Non-Cytoplasmic	32	42	0.76
Transmembrane Helix	43	66	0.84
Cytoplasmic	67	133	0.87